{
  "_id": "6a202ffdcd65a98ecbd0ee43",
  "Package": "TestNet",
  "Type": "Package",
  "Title": "A method for inferring microbial networks with false discovery\nrate control for clustered and unclustered samples",
  "Version": "1.0",
  "Authors@R": "person(\"Yi-Juan\", \"Hu\", role = c(\"aut\", \"cre\"), email = \"yijuan.hu@emory.edu\")",
  "Description": "TestNet is a testing method for inferring microbial\nnetworks. It differs from existing microbial network analyses\nin that it provides calibrated results by controlling the false\ndiscovery rate. TestNet accounts for the features of\ncompositionality, sparsity, and overdispersion in taxa count\ndata. It also accommodates both independent and clustered\nsamples, offers separate linear and nonlinear tests for each\npair of taxa, and includes an omnibus test that bypasses the\nneed to pre-specify the type of relationship for each pair of\ntaxa.",
  "License": "GPL (>=2)",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "R.rsp",
  "URL": "https://github.com/yijuanhu/TestNet",
  "BugReports": "https://github.com/yijuanhu/TestNet/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Repository": "https://yijuanhu.r-universe.dev",
  "Date/Publication": "2026-04-28 09:19:57 UTC",
  "RemoteUrl": "https://github.com/yijuanhu/testnet",
  "RemoteRef": "HEAD",
  "RemoteSha": "7623747e14e72d9abda01a99aaa8e073fecd169f",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-03 13:41:26 UTC",
    "User": "root"
  },
  "Author": "Yi-Juan Hu [aut, cre]",
  "Maintainer": "Yi-Juan Hu <yijuan.hu@emory.edu>",
  "MD5sum": "baa0d13ddef03f72d141fc6bb84495f0",
  "_user": "yijuanhu",
  "_type": "src",
  "_file": "TestNet_1.0.tar.gz",
  "_fileid": "d8b3e1cf7aa779a39330290c103e4d5306e557d19758cd5795b6fbfc74ec924f",
  "_filesize": 160799,
  "_sha256": "d8b3e1cf7aa779a39330290c103e4d5306e557d19758cd5795b6fbfc74ec924f",
  "_created": "2026-06-03T13:41:26.000Z",
  "_published": "2026-06-03T13:45:33.318Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79308173972,
      "time": 206,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7386349654"
    },
    {
      "job": 79308174001,
      "time": 185,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7386341827"
    },
    {
      "job": 79308173796,
      "time": 136,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7386320403"
    },
    {
      "job": 79308173919,
      "time": 160,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7386330690"
    },
    {
      "job": 79307662229,
      "time": 143,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7386257933"
    },
    {
      "job": 79308173771,
      "time": 125,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7386315716"
    },
    {
      "job": 79308174444,
      "time": 151,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7386326880"
    },
    {
      "job": 79308174021,
      "time": 148,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7386325957"
    },
    {
      "job": 79308173974,
      "time": 138,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7386321582"
    }
  ],
  "_buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/yijuanhu/testnet",
  "_commit": {
    "id": "7623747e14e72d9abda01a99aaa8e073fecd169f",
    "author": "Yijuan Hu <yijuan.hu@emory.edu>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Create LICENSE",
    "time": 1777367997
  },
  "_maintainer": {
    "name": "Yi-Juan Hu",
    "email": "yijuan.hu@emory.edu",
    "login": "yijuanhu",
    "description": "",
    "uuid": 22661669
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "permute",
      "role": "Imports"
    },
    {
      "package": "matrixStats",
      "role": "Imports"
    },
    {
      "package": "dcov",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "R.rsp",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "yijuanhu",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-17",
      "n": 6
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "yijuanhu",
      "count": 9,
      "uuid": 22661669
    }
  ],
  "_userbio": {
    "uuid": 22661669,
    "type": "user",
    "name": "Yijuan Hu"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/TestNet"
  },
  "_devurl": "https://github.com/yijuanhu/testnet",
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/TestNet.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/yijuanhu/testnet",
  "_realowner": "yijuanhu",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2026-06-02"
    }
  ],
  "_exports": [
    "TestNet"
  ],
  "_datasets": [
    {
      "name": "sim.otu.tab",
      "title": "OTU count table of the simulated microbiome samples",
      "object": "sim.otu.tab",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "taxon1",
        "taxon2",
        "taxon3",
        "taxon4",
        "taxon5",
        "taxon6",
        "taxon7",
        "taxon8",
        "taxon9",
        "taxon10",
        "taxon11",
        "taxon12",
        "taxon13",
        "taxon14",
        "taxon15",
        "taxon16",
        "taxon17",
        "taxon18",
        "taxon19",
        "taxon20",
        "taxon21",
        "taxon22",
        "taxon23",
        "taxon24",
        "taxon25",
        "taxon26",
        "taxon27",
        "taxon28",
        "taxon29",
        "taxon30",
        "taxon31",
        "taxon32",
        "taxon33",
        "taxon34",
        "taxon35",
        "taxon36",
        "taxon37",
        "taxon38",
        "taxon39",
        "taxon40",
        "taxon41",
        "taxon42",
        "taxon43",
        "taxon44",
        "taxon45",
        "taxon47"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "sim.otu.tab",
      "title": "OTU count table of the simulated microbiome samples",
      "topics": [
        "sim.otu.tab"
      ]
    },
    {
      "page": "TestNet",
      "title": "A testing method for inferring microbial networks",
      "topics": [
        "TestNet"
      ]
    }
  ],
  "_readme": "https://github.com/yijuanhu/testnet/raw/HEAD/README.md",
  "_rundeps": [
    "dcov",
    "matrixStats",
    "permute",
    "Rcpp",
    "RcppArmadillo"
  ],
  "_score": 3,
  "_indexed": true,
  "_nocasepkg": "testnet",
  "_universes": [
    "yijuanhu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-06-03T13:44:05.000Z",
      "distro": "noble",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "11a4beab77a883bf3ca7288a690fe445a2bafff0d5886ff61ee77f4136df4f9a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-06-03T13:43:29.000Z",
      "distro": "noble",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "eb9945ee62ec171d4be6655c4a3d5d499100641ade024a691269aa647522afb1",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-06-03T13:43:05.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "f229042509f517d3cdf7d0ee1ff519677470c57586ceaf0fa1be01f850927885",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "1.0",
      "date": "2026-06-03T13:43:20.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "ae79a0fec087c52ccfe90b8eda2c95b0fd76a04d2985f5431e73fb874dd2d607",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0",
      "date": "2026-06-03T13:43:46.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "3651000fe78433e487b825321f62d19e3c4f4f968ea33b676b0533cf276e70de",
      "status": "success",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-06-03T13:42:41.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "6c7d5ff3de719b8659f161b9f80a29b2c0ebb12f557ce576848f69de8a9d6d91",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0",
      "date": "2026-06-03T13:42:40.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "205c7cc454cd0041d8e46e564b611cd00b5036f122b8aa42064308ee830d34f9",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-06-03T13:42:32.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "8a107f0103c50c7b28e87c5d798e66ca1189e53c1d52cb6d7d91c341e99ae612",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/26888537477"
    }
  ]
}