{
  "_id": "6abe1ebb99f7aa8c6aa52616",
  "Package": "TestNet",
  "Type": "Package",
  "Title": "A method for inferring microbial networks with false discovery\nrate control for clustered and unclustered samples",
  "Version": "1.0",
  "Authors@R": "person(\"Yi-Juan\", \"Hu\", role = c(\"aut\", \"cre\"), email = \"yijuan.hu@emory.edu\")",
  "Description": "TestNet is a testing method for inferring microbial\nnetworks. It differs from existing microbial network analyses\nin that it provides calibrated results by controlling the false\ndiscovery rate. TestNet accounts for the features of\ncompositionality, sparsity, and overdispersion in taxa count\ndata. It also accommodates both independent and clustered\nsamples, offers separate linear and nonlinear tests for each\npair of taxa, and includes an omnibus test that bypasses the\nneed to pre-specify the type of relationship for each pair of\ntaxa.",
  "License": "GPL (>=2)",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "R.rsp",
  "URL": "https://github.com/yijuanhu/TestNet",
  "BugReports": "https://github.com/yijuanhu/TestNet/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Repository": "https://yijuanhu.r-universe.dev",
  "Date/Publication": "2026-04-28 09:19:57 UTC",
  "RemoteUrl": "https://github.com/yijuanhu/testnet",
  "RemoteRef": "HEAD",
  "RemoteSha": "7623747e14e72d9abda01a99aaa8e073fecd169f",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-10-01 08:44:12 UTC",
    "User": "root"
  },
  "Author": "Yi-Juan Hu [aut, cre]",
  "Maintainer": "Yi-Juan Hu <yijuan.hu@emory.edu>",
  "_user": "yijuanhu",
  "_type": "src",
  "_file": "TestNet_1.0.tar.gz",
  "_fileid": "https://r2.ropensci.org/2725c3c50944fbe4049c3b0a0e8b578b87c6ea21e3968c10b3f6104699c222f3",
  "_filesize": 162313,
  "_sha256": "2725c3c50944fbe4049c3b0a0e8b578b87c6ea21e3968c10b3f6104699c222f3",
  "_expires": "2027-01-09T08:50:01.000Z",
  "_created": "2026-10-01T08:44:12.000Z",
  "_published": "2026-10-01T08:50:03.522Z",
  "_jobs": [
    {
      "job": 110290703217,
      "time": 191,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11149923993"
    },
    {
      "job": 110290703350,
      "time": 186,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11149848664"
    },
    {
      "job": 110290703249,
      "time": 185,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "11149934259"
    },
    {
      "job": 110290703360,
      "time": 134,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11149279987"
    },
    {
      "job": 110289392551,
      "time": 223,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "11150242316"
    },
    {
      "job": 110290703293,
      "time": 99,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "11149958587"
    },
    {
      "job": 110290703395,
      "time": 142,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "11150435838"
    },
    {
      "job": 110290703224,
      "time": 114,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "11150480514"
    },
    {
      "job": 110290703359,
      "time": 143,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "NOTE",
      "artifact": "11149863845"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077",
  "_status": "success",
  "_upstream": "https://github.com/yijuanhu/testnet",
  "_commit": {
    "id": "7623747e14e72d9abda01a99aaa8e073fecd169f",
    "author": "Yijuan Hu <yijuan.hu@emory.edu>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Create LICENSE",
    "time": 1777367997
  },
  "_maintainer": {
    "name": "Yi-Juan Hu",
    "email": "yijuan.hu@emory.edu",
    "login": "yijuanhu",
    "description": "",
    "uuid": 22661669
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "permute",
      "role": "Imports"
    },
    {
      "package": "matrixStats",
      "role": "Imports"
    },
    {
      "package": "dcov",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "utils",
      "role": "Imports"
    },
    {
      "package": "R.rsp",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "yijuanhu",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-17",
      "n": 6
    },
    {
      "week": "2026-18",
      "n": 1
    }
  ],
  "_tags": [],
  "_stars": 1,
  "_contributors": [
    {
      "user": "yijuanhu",
      "count": 9,
      "uuid": 22661669
    }
  ],
  "_userbio": {
    "uuid": 22661669,
    "type": "user",
    "name": "Yijuan Hu",
    "followers": 20
  },
  "_downloads": {
    "count": 330,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/TestNet"
  },
  "_devurl": "https://github.com/yijuanhu/testnet",
  "_searchresults": 3,
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/manual.pdf",
    "extra/readme.html",
    "extra/readme.md",
    "extra/TestNet.html",
    "LICENSE"
  ],
  "_homeurl": "https://github.com/yijuanhu/testnet",
  "_realowner": "yijuanhu",
  "_cranurl": true,
  "_releases": [
    {
      "version": "1.0",
      "date": "2026-06-02"
    }
  ],
  "_exports": [
    "TestNet"
  ],
  "_datasets": [
    {
      "name": "sim.otu.tab",
      "title": "OTU count table of the simulated microbiome samples",
      "object": "sim.otu.tab",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "taxon1",
        "taxon2",
        "taxon3",
        "taxon4",
        "taxon5",
        "taxon6",
        "taxon7",
        "taxon8",
        "taxon9",
        "taxon10",
        "taxon11",
        "taxon12",
        "taxon13",
        "taxon14",
        "taxon15",
        "taxon16",
        "taxon17",
        "taxon18",
        "taxon19",
        "taxon20",
        "taxon21",
        "taxon22",
        "taxon23",
        "taxon24",
        "taxon25",
        "taxon26",
        "taxon27",
        "taxon28",
        "taxon29",
        "taxon30",
        "taxon31",
        "taxon32",
        "taxon33",
        "taxon34",
        "taxon35",
        "taxon36",
        "taxon37",
        "taxon38",
        "taxon39",
        "taxon40",
        "taxon41",
        "taxon42",
        "taxon43",
        "taxon44",
        "taxon45",
        "taxon47"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "sim.otu.tab",
      "title": "OTU count table of the simulated microbiome samples",
      "topics": [
        "sim.otu.tab"
      ]
    },
    {
      "page": "TestNet",
      "title": "A testing method for inferring microbial networks",
      "topics": [
        "TestNet"
      ]
    }
  ],
  "_readme": "https://github.com/yijuanhu/testnet/raw/HEAD/README.md",
  "_rundeps": [
    "dcov",
    "matrixStats",
    "permute",
    "Rcpp",
    "RcppArmadillo"
  ],
  "_score": 3,
  "_indexed": true,
  "_nocasepkg": "testnet",
  "_universes": [
    "yijuanhu"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0",
      "date": "2026-10-01T08:46:20.000Z",
      "distro": "resolute",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/f119d6268f0f30df45c83668a5ab7e9a09b582b6679dd96b5c20bb8fdb1e6d79",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0",
      "date": "2026-10-01T08:46:15.000Z",
      "distro": "resolute",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/c7481cb2c3401a7027701be0a8ee68e08c11c0b30ef7a5b2e9d1a6abb6b22faa",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0",
      "date": "2026-10-01T08:48:12.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/25cc38a2a8065877cb4c4a7ef9c944795d5e7022475c0e1c5d969709890c8d19",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0",
      "date": "2026-10-01T08:47:57.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/17cfc49bd39d367126886b092103c0ca6d94b4e581f5273b3ba9da8bf696632e",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0",
      "date": "2026-10-01T08:46:14.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/8f61218ed9fccfc3212484cee29491d0ce4c6b95b4c75c73685afac0efc53c75",
      "status": "success",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0",
      "date": "2026-10-01T08:45:15.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/51a05554610e8d4aa6901ce5a0119b20f11b727fd3ee333797396558a02002b5",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0",
      "date": "2026-10-01T08:45:12.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/b01fd1925d9fe87915df04b9e5d87aa71ee3a93603043c4622f01647a8d876d5",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0",
      "date": "2026-10-01T08:45:18.000Z",
      "commit": "7623747e14e72d9abda01a99aaa8e073fecd169f",
      "fileid": "https://r2.ropensci.org/d3d6e32a511bfe52dada91bbf426a8749e834e53cdd4c38889d41704b1ec5119",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/yijuanhu/actions/runs/36837783077"
    }
  ]
}